The Complete Guide to Using Knowledge Graphs For Wafer Defect Detection in 2025

They all rely on knowledge graphs (KGs) to process intricately complex, interlinked data.

What do Google search, Facebook’s recommendations and modern wafer defect detection have in common?

They all rely on knowledge graphs (KGs) to process intricately complex, interlinked data.

What are Knowledge Graphs?

Knowledge graphs organize data from different sources with varying structures. They create the clearest view of defect traceability by connecting nodes, edges, and labels.

In the case of Google, KGs store data for search and retrieval tasks to provide users with a seamless research experience. This process, called semantic enrichment, allows the graph to understand individual objects and their relationships.

Google’s Assumed Knowledge Graph for Apple Inc. Source: SEMRush

The same methodology can be applied to semiconductor quality control. Considering the challenges posed by process precision reaching sub-5 nm levels, it becomes difficult for traditional quality inspection methods to catch up with the sheer volume and complexity of data generated.

In this guide, we’ll explore how KGs and a popular deep-learning technique called Convolutional Neural Networks (CNNs) are at the core of modern wafer defect detection, enabling manufacturers to meet the increasingly stringent demands of modern chip production.

In the end, we’ll discuss how yieldWerx’s Defect Management Module can help optimize semiconductor yield, reducing material waste and improving product reliability.

Why Traditional Manual Inspection Fall Short?

Imagine trying to find a needle in a haystack, but the haystack keeps growing and the needles keep changing shape.

This is similar to the challenge test engineers face in semiconductor manufacturing today, where defects are constantly evolving and the scale of production continues to increase. On average, a semiconductor wafer undergoes between 500 to 1,000 steps before completion.

Here’s why manual inspection and traditional image processing methods fall short for wafer surface defect detection.

Limitations of Manual Inspection

Manual inspection is still widely used in the semiconductor industry but it doesn’t detect localized failure patterns. Inspectors struggle with both efficiency and accuracy, making it difficult to meet the high precision standards. The quality of inspection can vary due to differences in judgment regarding what is considered good or bad. Inspectors’ varying skill levels can influence their assessments, leading to inconsistencies.

Challenges of Large-Scale Production

As wafer production scales up, manual inspection becomes less effective. New production defects may arise continuously, often without labeled data to identify them. Even when known defect patterns exist, labeling them is time-consuming, costly, and requires expert knowledge.

Inadequacy of Traditional Image Processing Techniques

Traditional image signal processing techniques have been commonly used in wafer surface defect detection. While these methods have their place, they often fall short when faced with the dynamic and intricate nature of semiconductor defects. Common techniques include wavelet transform, spatial filtering, and template matching.

Spatial filtering

Spatial filtering is an established image enhancement technique used for image denoising by applying spatial convolution to gray values without causing blurring. It employs smoothing and sharpening filters to improve image quality, which is particularly useful for defect detection. Methods like median and mean filters are commonly applied to reduce noise.

(a) original image, (b) median filter denoising, and (c) mean filter denoising.

However, the effectiveness of spatial filters is heavily dependent on selecting the right internal parameters, which can be challenging. The technique may blur fine details, making small manufacturing defects harder to detect.

Efficient image compression and local storage options are critical for post-processing and data management, especially since some defects are detectable at a very granular level (single pixel). The resolution requirements also increase the file size of images, which complicates post-processing.

yieldWerx offers a comprehensive suite of solutions for both suppliers and consumers of automotive parts. Contact Us and learn how you can achieve Zero PPM manufacturing goals.

Common Wafer Surface Defect Patterns

Source: Engineering Application of AI Journal Paper

Line Defects

These appear as continuous lines on the wafer, often caused by issues during the lithography or etching process. They can result from scratches, contamination, or equipment malfunctions and may affect the functionality of semiconductor devices if they cross critical paths.

Center Defects

Located at the center of the wafer, these defects typically result from issues with the wafer processing or handling, such as contamination or uneven deposition. They can affect the entire device’s performance if in critical areas.

Donut Defects

Ring-shaped defects that typically form around the center or along the edges of the wafer. They are often caused by uneven material deposition or etching, creating a circular ring of defective areas.

Scratch Defects

Linear or curved marks on the wafer’s surface caused by mechanical damage or contamination during handling, transport, or cleaning. These defects can cause failure points, particularly if located in sensitive areas.

Moon Defects

Moon-shaped defects are typically crescent-shaped and usually occur due to variations in the deposition process control. These defects can be caused by shadowing effects, contamination, or issues with the mask alignment.

Reticle Defects

Reticle defects are related to the photomask/reticle used in the lithography process. Any defects on the reticle, such as particles or imperfections, can result in corresponding defects on the wafer during the photolithography step, leading to patterning issues like missing or distorted features.

Edge Defects

These defects appear along the edges of the wafer and are often caused by handling, contamination, or mechanical stresses during processing.

It is important to know that test engineers frequently encounter combinations of these defects and must address them accordingly.

Wafer Defect Detection Complications in Complex Stacked Chips

Stack of individual chips connected by ‘through silicon vias’ (TSVs). Credit: IBM

Modern stacked chip architecture offers several benefits such as reduced power consumption and space requirements. However, they pose several challenges with regards to defect detection. Here we discuss some of them.

Defect Identification in Stacked Layers:

With the multi-layered structure of stacked chips, defects in one layer can be difficult to detect because they may be hidden beneath other layers. For instance, defects such as voids in the glue or cracks in the silicon substrate, which may not be visible from the surface, need advanced imaging techniques like Near-Infrared (NIR) microscopy for detection.

Small Features and High Aspect Ratios:

The formation of Through-Silicon Vias (TSVs) with small diameters (as small as 5 µm) and high aspect ratios poses a challenge for traditional metrology tools. Accurate measurement of such small and complex features requires high-resolution optical systems that can penetrate through stacked layers without compromising resolution.

Wafer Thinning and Back-Side Processing:

After wafer thinning, there is a need for precise measurements of the remaining silicon thickness (RST) below TSVs. The process of thinning and back-side processing creates rough surfaces and introduces new potential defects, requiring specialized techniques to measure and detect these changes accurately.

Co-Planarity and Gap Measurement:

During die stacking and bonding, ensuring the uniformity of pillar height and co-planarity becomes crucial. The challenges in detecting gaps or misalignment between stacked layers can affect the overall reliability of the final device. Gaps that vary across the wafer, especially at the edges, are often harder to detect and need advanced measurement methods.

Quality Control Variations Due to Dispersed Supply Chain

Semiconductor supply chain is spread throughout the world. Any variation in quality control systems across different regions can lead to inconsistencies in the quality of materials or components used at different stages of production. This complicates defect detection, especially in cases where defects may emerge only after certain stages in the production process. Data traceability becomes highly crucial for yield management. Organizations like NIST and SEMI have developed several quality control and transportation standards to mitigate this issue.

Supercharging Wafer Defect Detection Using Knowledge Graphs and Convolutional Neural Networks

Source: Overview of the proposed graph-based semi-supervised learning methodology

Combining CNNs and KGs for wafer defect detection presents a powerful approach in semiconductor manufacturing, where both image-level accuracy and process-level understanding of failure modes and effects are essential.

What are Convolutional Neural Networks?

CNNs serve as highly capable visual analyzers, trained to process optical or SEM (Scanning Electron Microscope) images of wafers and detect a range of defects, including scratches, donut-shaped patterns, edge anomalies, contaminants, and electrical issues like opens and shorts. These supervised learning networks output feature maps, predict defect types, and calculate confidence scores—essentially acting as intelligent microscopes that not only see but also classify what’s on the wafer.

Traditional machine learning methods like decision trees, random forests, or support vector machines (SVMs) typically require manual feature extraction, where someone must carefully design features (like edges, shapes, or textures) to represent the data well.

CNNs automatically learn hierarchical features directly from raw data (such as pixel values). They are well-suited for image data because they can extract low-level features (edges, textures) in the first layers and complex high-level features (objects, patterns) in deeper layers. This eliminates the need for manual feature engineering.

Source: Applied Sciences Journal

Once defects are identified, their information can be semantically mapped into a knowledge graph. In a KG, each defect becomes a node, and its relationships with root causes, process steps, tools, yield implications, and historical patterns are represented as edges.

For example, a bridging defect may be linked to the metal layer and associated with lithography misalignment. This contextual mapping provides a deeper understanding of each defect’s significance and potential origin.

The real strength of this combination lies in the reasoning capabilities of the knowledge graph. By leveraging graph-based learning techniques, the system can trace detected defects back to specific process steps, identify patterns across wafers or lots, and prioritize high-impact anomalies. These insights not only aid in immediate root cause analysis but can also power predictive models that recommend corrective actions. Moreover, such algorithms offer scalability and seamless integration capabilities with existing Automated Optical Inspection (AOI) systems making them suitable for real-world semiconductor manufacturing environments.

yieldWerx Defect Detection with Knowledge Graph Integration

yieldWerx Defect Detection Module improves product quality and reliability by leveraging powerful knowledge graphs to efficiently manage and analyze Metrology/Defect Data. This process allows industry players, especially automotive parts manufacturers to identify yield-impacting issues much faster and more accurately, reducing the cost of quality.

Under the hood, our powerful algorithms powered by knowledge graphs are at play. They help companies save time and money through smart decision-making capabilities. It allows for improved understanding of the relationships between defects, their causes, and their impact on the production process.

Moreover, the Enhanced Data Connectivity offered by this module connects die-level data throughout the entire manufacturing lifecycle, using unique IDs to track and analyze defects from the initial stages to the final test.

Schedule a Live Demo to see our Defect Management module in action.

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Privacy Policy 2026

Effective Date: Jan 1, 2024 

Last Updated: July 22, 2026 

At yieldWerx, Inc. (“yieldWerx,” “we,” “us,” or “our”), we respect your privacy and are committed to protecting the personal information collected through our website, portals, evaluation sandboxes, and digital services (collectively, the “Site”). 

This Privacy Policy explains how we collect, use, disclose, and safeguard personal information when you visit yieldWerx.com, request product demos, download technical datasheets, register for portal access, or interact with our enterprise yield management services. 

1. Important Notice: Customer Data vs. Website Visitor Data

1.1 Customer Data (As a Data Processor): In providing enterprise semiconductor yield management platforms, yieldWerx processes datasets on behalf of our corporate clients (e.g., wafer test data, STDF logs, manufacturing metrics). Our clients control this “Customer Data.” The collection, security, and processing of Customer Data are governed by our client contracts (Master Services Agreements and Data Processing Agreements) and our clients’ privacy policies—not this public Privacy Policy. 

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2. Information We Collect

We collect information directly from you, automatically through your device, and from reputable commercial third parties. 

A. Information You Voluntarily Provide 

Business Contact Information: Name, job title, corporate email address, phone number, company name, primary industry/domain, and geographic location when you fill out contact forms, schedule demos, or request technical datasheets. 

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C. Information from Third Parties 

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Security Infrastructure: We maintain organizational, technical, and physical safeguards—including encryption, firewalls, and strict access controls—designed to protect personal information against unauthorized access, loss, or alteration. 

Retention Period: Personal information is retained only as long as necessary to fulfill the purposes outlined in this policy, unless a longer retention period is required or permitted by law (e.g., tax, audit, or legal defense obligations). 

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yieldWerx operates globally. Information collected through yieldWerx.com may be transferred to, stored, and processed in the United States or other countries where yieldWerx or its service providers maintain facilities. We implement appropriate safeguards (such as Standard Contractual Clauses) to ensure your data receives protection equivalent to applicable privacy laws in your home jurisdiction. 

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Depending on your jurisdiction (e.g., California/CPRA, European Economic Area/GDPR), you may hold the following rights regarding your personal information: 

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To submit a data access or deletion request, please email us at trust@yieldwerx.com. 

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yieldWerx.com may contain links to external third-party sites (e.g., industry consortia, event partners, or technical standards organizations). We are not responsible for the privacy practices or content of external websites. We encourage you to review the privacy policy of any site you visit. 

10. EnterpriseCustomer Data & Data Processing Addendum (DPA) 

While this Privacy Policy primarily addresses information collected from visitors to yieldWerx.com and our public marketing platforms, yieldWerx also acts as a Data Processor for enterprise clients who subscribe to our semiconductor yield management platform. 

  • Customer Ownership: All client data uploaded into yieldWerx software remains the exclusive property of our enterprise customers. yieldWerx processes this data solely to deliver the analytical services contracted under our Master Services Agreement (MSA). 
  • Data Processing Addendum (DPA): For customers processing personal data or telemetry subject to global privacy regulations (such as GDPR or CCPA/CPRA), yieldWerx incorporates a comprehensive Data Processing Addendum into our standard enterprise software contracts. 

Enterprise customers requiring a copy of our standard DPA or customized data transfer agreements may contact trust@yieldwerx.com. 

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yieldWerx retains personal data and information collected through our public website only for as long as necessary to fulfill the operational, legal, or commercial purposes outlined in this policy: 

Marketing & Communication Data: Contact information submitted via forms (e.g., demo requests, whitepaper downloads) is retained until you unsubscribe or request deletion. 

System & Audit Logs: Server logs, IP addresses, and website security records are retained for security audit purposes for up to 12 months, after which they are automatically anonymized or purged. 

Enterprise Customer Production Telemetry: Parametric test logs, STDF data, and chip analytics uploaded to our platform are stored, archived, or deleted in strict compliance with the custom retention schedules defined in each client’s Master Services Agreement (MSA) and Data Processing Addendum (DPA). 

12. Security by design

We ensure complete data protection through industry-standard encryption of data in transit (using TLS, SFTP, and site-to-site VPN) and at rest. Security across our platform is strictly managed using role-based access control (RBAC) and multi-factor authentication (MFA), backed by continuous security monitoring, patch management, and vulnerability management. Additionally, physical security controls are maintained across all yieldWerx facilities. 

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We maintain a formal incident-response program with defined severity classifications and escalation timelines. If a security incident affecting customer data is confirmed, we commit to notifying the customer’s designated contact within 24 hours of confirmation and assigning a single named incident liaison for the duration of the event. If the investigation is ongoing, we deliver an interim update within 48 hours, followed by a full incident report detailing the root cause and remediation steps within 72 hours. 

We welcome good-faith security research. If you believe you’ve found a vulnerability in a yieldWerx product or service, please report it to trust@yieldwerx.com. We investigate every report and will not pursue legal action against researchers acting in good faith. 

14. CCPA Service Provider Commitment:

To the extent yieldWerx processes personal information subject to the California Consumer Privacy Act (CCPA/CPRA) on behalf of Customer, yieldWerx acts solely as a Service Provider. yieldWerx shall not: (a) sell or share such personal information; (b) retain, use, or disclose personal information for any purpose other than providing the contracted services; or (c) combine personal information received from or on behalf of Customer with personal data received from other sources, except as permitted under the CCPA. 

15. Updates to This Privacy Policy

We reserve the right to update this Privacy Policy to reflect changes in our legal obligations, privacy practices, or operational services. When updates occur, we will revise the “Last Updated” date at the top of this page. Continued use of yieldWerx.com after updates are posted signifies your acknowledgment of the revised terms. 

16. Contact Information

If you have questions, concerns, or requests regarding this Privacy Policy or yieldWerx’s privacy practices, please contact us at: 

yieldWerx Semiconductor 

Suite 202 8105 Rasor Blvd Plano, TX 75024 

Attn: Privacy & Data Protection Office 

Email: trust@yieldwerx.com 

Website: https://yieldwerx.com 

wats

WATS

Partner

WATS is a test data management and analytics platform developed by Virinco, built to collect, standardize, and analyze data from electronics manufacturing test systems. It provides real-time visibility into board-level performance across ICT, functional test, and final test operations, helping engineers monitor yield, detect anomalies, and improve quality at high volume.

EnlightTec

Partner

Enlight Technology is one of the few domestic electronic design automation (EDA) solution providers. Our primary mission is to develop chip and electronic hardware, as well as system development tools, striving to help customers bring their products from concept to market with the best efficiency and effectiveness.
We integrate EDA technology resources and solutions, leveraging practical experience and technical support capabilities to build a complete cross-disciplinary ecosystem covering silicon photonics, chips, advanced packaging, systems, and manufacturing. Enlight Technology is one of the very few Taiwanese EDA solution providers with both electrical and optical design capabilities. It offers one-stop support, from silicon photonics (PIC) optoelectronic integration circuit design and EIC–PIC co-design, to end-to-end design verification of ICs, packages, and PCB systems:

  • Silicon Photonics & EIC–PIC Co-design
  • IC Design & Verification
  • PCB Systems Design & DFM (Design for Manufacturability)
modus_test_img

Modus Test

Partner

Modus Test, LLC was founded on the idea that there are creative ways to improve results by combining innovation with the best known methods in test design and manufacturing. Providing innovative test solutions include the MPT series of parametric test and systems and accessories.
Modus Test has a global presence and the capability to support customers in all the IC development centers and high volume manufacturing sites around the world. See for yourself how combining innovation with best-known methods can improve your results.
PTC-Logo

PTC

Partner

PTC is a semiconductor consulting firm based in Malaysia, providing strategic and technical consulting services to semiconductor manufacturing, assembly, test, product and ecosystem companies across Asia. yieldWerx, a leading innovator in semiconductor yield management solutions, and PTC, a premier Malaysia-based consulting firm for the semiconductor manufacturing industry, have announced a strategic collaboration to address the growing need for comprehensive data analytics across the semiconductor manufacturing lifecycle in the rapidly expanding markets of Malaysia and India.
This collaboration combines yieldWerx’s state-of-the-art analytics platform with PTC’s extensive industry knowledge and regional presence to strengthen semiconductor manufacturing capabilities across East Asia. By providing sophisticated analytics solutions tailored to regional needs, yieldWerx and PTC aim to streamline factory setup and operations, implement rigorous quality assurance protocols, and accelerate the development of sustainable semiconductor ecosystems across both countries. PTC will act as the regional consulting partner, offering advisory, deployment support, and strategic integration services to fabless clients, OSAT facilities, and manufacturing startups adopting the platform.